PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000210785
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family TCP
Protein Properties Length: 398aa    MW: 42180.8 Da    PI: 10.2213
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000210785genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP132.93e-4168185289
            TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg........ 88 
                    ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++  + s +ss+s+ s +        
  MDP0000210785  68 PPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSMSVPsqlrssyy 163
                    789******************************************************************999877777777775555555555565 PP

            TCP  89 .....................k 89 
                                         +
  MDP0000210785 164 spnfslqqnqrrslfqgiglsS 185
                    5555565555433444444432 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036347.1E-4172210IPR005333Transcription factor, TCP
PROSITE profilePS5136927.92374128IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    Send to blast
MRSWKEVMII NSTTTTTTIN NTNNINNNIT TPSPPSTPPP PTTRPLLPQP QPPQLSKLLP  60
PSPPKKPPPK RTSTKDRHTK VDGRGRRIRM PALCAARVFQ LTRELGHKSD GETIEWLLQQ  120
AEPAVIAATG TGTIPANFTS LNISLRSSGS SMSVPSQLRS SYYSPNFSLQ QNQRRSLFQG  180
IGLSSSDSSS TLLNFQTNTM HASMLQAKQE LRDTVSLDLS EAASAGEGSL GGRKRRPPEQ  240
DLNHMGGGGG GGGGGGGYLL QSSTGVVPAS HPHSQIPANF WMLANSNNQV MSGDPIWTFP  300
ASVNNSGLYR GTMPGGLHFM NFPAPVTVLP NQQQLSGSGG GGGNDGDNMS DGQLNMLAGL  360
NPYRHMSGTG VSDSQQASGS HSHHGGGDDR HDSTSHHS
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.232890.0bud
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007209184.10.0hypothetical protein PRUPE_ppa006389mg
SwissprotQ93Z007e-61TCP14_ARATH; Transcription factor TCP14
TrEMBLM5WM860.0M5WM86_PRUPE; Uncharacterized protein
STRINGVIT_17s0000g06020.t011e-139(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF21203280
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47620.17e-43TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14